BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003H08SP1|AL425202
(995 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1682 642 0.0
3x_Contig816 149 1e-35
>3x_Contig1682
Length = 16889
Score = 642 bits (323), Expect = 0.0
Identities = 337/343 (98%)
Strand = Plus / Minus
Query: 653 attttgcattagatgccagtggaagactcaagacgataagaagacacgtctgtcaatcaa 712
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16889 attttgaattagatgacagtggaagactcaagacgataagaagacacgtctgtcaatcaa 16830
Query: 713 ttaggagacacagctggggaaactacttagaatgtggagattagacaaattgtcattttt 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16829 ttaggagacacagctggggaaactacttagaatgtggagattagacaaattgtcattttt 16770
Query: 773 ttgttgggcaagagatggaatgtagtatacaaaggttttatttgaatataattttgagat 832
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 16769 ttgttgggcaagagatggaatgtagtaaacaaaggttttatttgaatataattttgagat 16710
Query: 833 cataagtttaaagcacattctgtaggtatttttaccaccaacagaacgtgggaataaata 892
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 16709 cataagtttaaagcacattctgtaggtatttttaccaccaacagaacgtggaaataaata 16650
Query: 893 aatagaaacatcaacaggctatacatctacaataaataamatgtaataatttcgccagag 952
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 16649 aatagaaacatcaacaggctatacatctacaataaataaaatgtaataatttcgccagag 16590
Query: 953 tggtatgaaatgcaagcmtcaatatgtgcaagattagcggaaa 995
||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 16589 tggtatgaaatgcaagcatcaatatgtgcaagattagcggaaa 16547
>3x_Contig816
Length = 2278
Score = 149 bits (75), Expect = 1e-35
Identities = 75/75 (100%)
Strand = Plus / Plus
Query: 1 ctcatcattgccagtggaacaatctcagagtctcgtacatgatatgtgctcctcttttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2204 ctcatcattgccagtggaacaatctcagagtctcgtacatgatatgtgctcctcttttca 2263
Query: 61 cgattccaatctatt 75
|||||||||||||||
Sbjct: 2264 cgattccaatctatt 2278
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,754
Number of Sequences: 1807
Number of extensions: 12754
Number of successful extensions: 94
Number of sequences better than 1.0e-20: 2
length of query: 995
length of database: 10,358,551
effective HSP length: 16
effective length of query: 979
effective length of database: 10,329,639
effective search space: 10112716581
effective search space used: 10112716581
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)